FMIPA USU memiliki 17 Program Studi yaitu :
| Program Studi S1 Matematika |
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Program Studi S1 Fisika |
| Program Studi S1 Kimia |
| Program Studi S1 Biologi |
| Program Studi D3 Metrologi dan Instrumentasi |
| Program Studi D3 Fisika |
| Program Studi D3 Kimia |
| Program Studi D3 Statistika |
| Program Studi D3 Teknik Informatika |
| Program Studi S2 Matematika |
| Program Studi S2 Fisika |
| Program Studi S2 Kimia |
| Program Studi S2 Biologi |
| Program Studi S3 Matematika |
| Program Studi S3 Fisika |
| Program Studi S3 Kimia |
| Program Studi S3 Biologi |